Eik:
Perhaps things should slow down a bit here, so more carefully considered responses may be given. Especially since you seem to be responding to everyone! (That's not bad, it's just a fact that you are writing the most here).
"I am not sure what you mean here. Munk talks about one thing and you answer with another. I don't know if it was your intention or if you don't have all tings clear on this subject.
You have mentioned one of the mechanisms of how variation arises and gives rise to new adaptations. Munk asked about the time aspect for selection to cull old adaptations."
This was munk's question:
"All populations started from hunter gatherer. What DNA do you think lost in the transition from that to 'modern' society? You think it just goes away in 100 years of non use? 500? "
He asks about DNA being lost? I believe that I was on topic to point out that essentially, there is a difference between being "lost" and not being expressed, and that little is thought to be lost. Is it irrelevant that a single regulatory gene ("switch") control the expression of a much larger chunk of DNA and that this can occur in an instant compared to the time required for the evolution of the genes under it's control?
Regulatory genes that cause others to be expressed are "turned on" and "turned off" all the time during the lifetime of an organism. DNA and the transcription of parts of it's "message" does a LOT more than give rise to traits and adaptations in subsequent generations.
YOU assumed that an adaptation (between generations) was the issue. In effect, you wrapped a paradigm around the issue and attacked my response because it didn't fit. I don't know what munk thought regarding the "mechanism" of DNA's role, he didn't say. I think he has a point, in that you may appear to be more confrontational than you desire. You may be also too quick to view everything under the lens of your speciality (as it exists where you study
).
Lots of undefined terms floating around in this discussion. For instance, say that due to the pressures of a particular locale, individuals in a population of organisms up-regulate a few neuro-transmitters to higher levels than another population in a different local. This is a response of the individuals of the population, within one generation. In common parlance, this would be described as "adaptation". That is clearly not what is meant by adaptation in the evolutionary sense. I don't know what the correct, precise term for this change in an individual would be for you.
[Example: different levels of "stress hormones" and neurotransmitters between top-ranking baboon and lower members. Remove dominant male, and new one takes the top position, with subtle but detectable changes in biochemistry]. To rephrase, "adaptive behavior" (and even mood, perception) often has a biochemical basis that is regulated on a very short time scale by the expression of proteins encoded by DNA.
Part of the problem is that often, common terms are co-opted by scientists and given (necessarly) very precise and limited meanings. Like most people, scientists can be lazy, or not agree among themselves on new vocabulary, so this is the easy solution. This gives rise to problems in discussions between specialists and others. Imagine a conversation between a mathematician and a auto mechanic concerning manifolds! It also may provide an illusion of greater accesability to the uninitiated if common terms are used instead of "jargon". To confuse things further, the usage of such terms often is refined or changed by the scientists themselves as the science grows or may be under active debate. Let's all use care if the discussion is to have any meaning.