Good advice hear pinnah! Yes, any kind of movement caused some "chill". Will try those wind shirts for sure. And, I mentioned it above already, the hips got cold so yes, I believe the insulation from the ground was not sufficient.
Two questions...
1) Did you sleep in the base layer shirt that you had hiked in? Ditto the fleece sweater?
2) Does your bag have an inner draft collar and if so, did you have it tightly cinched up?
Regarding base layers, here in the Whites of New Hampshire, there are 3 common approaches. The first and most common is people sleeping in the shirt they just hiked in. It's damp and the morning complaint is being "chilly". Not cold. But "chilly". Our bodies sweat constantly and we don't notice it normally. But in a cold sleeping bag, you'll feel it if cold air moves the moist air next to your skin. A damp shirt next to the skin keeps you just a teeny bit damp and that's how you get "chills".
The second approach is to carry a second, dry shirt (and long johns) and to change them just before/after bed. I've not found this to be the best as I end up getting the dry shirt wet by morning.
The third and least approach is to use a Vapor Barrier shirt. Stephenson's Warmlite still makes a true, non-breathable VB shirt and on really cold trips, I carry this. I put it on in camp over my base layer and under my fleece. I wear it while cooling down and it turns my core heat into dry heat, which forces some of the moisture out of my damp fleece. I do stay damp inside the VB shirt but it works. I don't chill and my body stops needing to sweat, so I minimize fluid loss. On less cold trips, I carry a Pertex Windshirt designed by Will Steger for his Antarctic crossing. It's essentially a cycling/xc top but I use it just like the VB shirt, over my inner layer and under my fleece. It slows (doesn't stop) the transport of moisture and all but eliminates the "chilling" effect of moving in your sleep which exhausts the air from the micro climate near the skin. A cheap way to do this is to get a cheap running jacket and stitch the back vent closed.
Regarding the sleeping bag, I find that I get chilled if I allow any movement of air in and and out of the bag as I sleep. I find a tight fitting draft collar to be a) a royal PITA and b) essential. If a bag doesn't have one, I'll wrap my fleece sweater in a roll and stuff it around my neck to act as one.
Regarding cold hips, non-compressible clothing like your fleece pants can go under your pads to boost the R value under you. Still, that's surprising to me that you got cold hips with double pads.
Regarding double bagging, I don't advise it unless it's the only option to get bulk warmth. As others have noted, it's not efficient as it compresses the inner bag and it's heavy. I would rather sleep in my high loft jacket than carry a second bag.
Regarding bivy sacks, I don't like them for winter. In floored tent, I prefer to use just a bag as it minimizes moisture condensation on the bag. Bivy sacks tend to hold moisture next to the bag. In a floorless tent, I use a larger bag cover with a rectangular foot print, waterproof bottom and very breatheable Pertex top. Mine is an ancient TNF. Sleeping pad goes INSIDE the bag cover, which prevents the problem of getting snow between the pad and the bag. I don't sleep out unprotected entirely in the winter.
Regarding candle lanterns, I carry one for emotional support more than warmth. Cheers up the tent a lot. Bag and jacket are the key to warmth though, as is the VBL shirt.
More of my thoughts on VBLs here. Bottom line, I continue to use VBL shirts (at night) and socks (during the day).
http://home.comcast.net/~pinnah/DirtbagPinner/vb.txt